A comparative account of the structure of the growth hormone encoding gene and genetic interrelationship in six species of the genus <Emphasis Type="Italic">Labeo</Emphasis>

The growth hormone (GH) gene isolated and cloned from various Labeo species (L. rohita, L. calbasu, L. fimbriatus, L. gonius, L. bata, and L. kontius) is shown to contain a single copy in the haploid genome, with an overall size of ∼2.5 kb. The GH gene in all the Labeo species studied has five exons and four introns of various sizes with the exon/intron boundary sequence of GT/AG. The length variation of the GH gene between the species is found to be due to length variation in the form of several deletions in the third intron. The length of individual exons is the same in all the species with an open reading frame (ORF) of 630 bp (210 amino acids) except in L. rohita, which has a 9 bp deletion in the fourth exon, resulting in a shorter GH of 621 bp (207 amino acids). The similarity in the nucleotide and amino acid sequences between the different Labeo species is greater than 97%, in spite of eight amino acids being altered in the GH protein of Labeo that reside outside the conserved domain sequence required for its function. Nucleotide substitutions are seen in the form of 20 transitions and three transversions in the ORF of the GH gene. Both types of transitions (A–G; T–C) and only one type of transversion (A–C) are detected in the GH gene. Codon preference in GH gene shows a strong preference for G and C in the wobble position of the codons. Genetic interrelationships determined between Labeo and other species of fishes using nucleotide sequence of GH cDNA supports the overall teleost classification of Nelson (Fishes of the World. Wiley, New York, 1984) with separate clades for Ostariophysi, Protacanthopterygii, and Acanthopterygii. Besides, the unweighted pair group method with arithmetic means (UPGMA) analysis clearly distinguishes between the species having five exons and four introns in the GH gene from the species having six exons and five introns in the same gene. The Labeo species analyzed in the present study could be clustered into two groups using the maximum-parsimony method on the intron sequences data of the GH gene.     

Influence of noncellulosic contents on nano scale refinement of waste jute fibers for reinforcement in polylactic acid films

In the present study, nanofibrils of cellulose are extracted from waste jute fibers using high energy planetary ball milling process in wet condition. The rate of refinement of untreated fibers having non-cellulosic contents was found slower than treated fibers due to strong holding of fiber bundles by non-cellulosic contents. At the end of three hours of wet milling, untreated fibers were refined to the size of 850 nm and treated fibers were refined to the size of 443 nm. In the subsequent stage, composite films of poly lactic acid (PLA) were prepared by solvent casting with 3 wt% loading of untreated jute nanofibrils, treated jute nanofibrils and microcrystalline cellulose. The influence of non-cellulosic contents on mechanical properties of PLA films are investigated based on results of tensile test, dynamic mechanical analysis and differential scanning calorimetry. The maximum improvement was observed in case of treated jute nanofibril/PLA composite film where initial modulus and tensile strength increased by 207.69 % and 168.67 %, respectively as compared to neat PLA film. These improvements are attributed to the increased interaction of treated jute nanofibrils with PLA matrix due to their higher precentage of cellulosic contents and mechanically activated surface.     

Application of biotechnology in breeding lentil for resistance to biotic and abiotic stress

Summary Lentil is a self-pollinating diploid (2n = 14 chromosomes) annual cool season legume crop that is produced throughout the world and is highly valued as a high protein food. Several abiotic stresses are important to lentil yields world wide and include drought, heat, salt susceptibility and iron deficiency. The biotic stresses are numerous and include: susceptibility to Ascochyta blight, caused by Ascochyta lentis; Anthracnose, caused by Colletotrichum truncatum; Fusarium wilt, caused by Fusarium oxysporum; Sclerotinia white mold, caused by Sclerotinia sclerotiorum; rust, caused by Uromyces fabae; and numerous aphid transmitted viruses. Lentil is also highly susceptible to several species of Orabanche prevalent in the Mediterranean region, for which there does not appear to be much resistance in the germplasm. Plant breeders and geneticists have addressed these stresses by identifying resistant/tolerant germplasm, determining the genetics involved and the genetic map positions of the resistant genes. To this end progress has been made in mapping the lentil genome and several genetic maps are available that eventually will lead to the development of a consensus map for lentil. Marker density has been limited in the published genetic maps and there is a distinct lack of co-dominant markers that would facilitate comparisons of the available genetic maps and efficient identification of markers closely linked to genes of interest. Molecular breeding of lentil for disease resistance genes using marker assisted selection, particularly for resistance to Ascochyta blight and Anthracnose, is underway in Australia and Canada and promising results have been obtained. Comparative genomics and synteny analyses with closely related legumes promises to further advance the knowledge of the lentil genome and provide lentil breeders with additional genes and selectable markers for use in marker assisted selection. Genomic tools such as macro and micro arrays, reverse genetics and genetic transformation are emerging technologies that may eventually be available for use in lentil crop improvement.     

Plant defense activation and management of tomato root rot by a chitin-fortified <Emphasis Type="Italic">Trichoderma/Hypocrea</Emphasis> formulation

Tomato root rot caused by Rhizoctonia solani is a major soilborne disease resulting in significant yield loss. The culture filtrates of six isolates of Trichoderma/Hypocrea species were evaluated for in vitro production of hydrolytic enzymes. Results demonstrated that all the six isolates were able to produce chitinase, β-1, 3 glucanase and protease in the range of 76–235 μmol GlcNAc min^-1 mg^-1 protein, 31.90–37.72 nmol glucose min^-1 mg^-1 proteins and 63.05–86.22 μmol min^-1 mg^-1 proteins, respectively. Trichoderma/Hypocrea-based formulation(s) were prepared with chitin (1% v:v) and CMC (0.5% w:v) for root rot management in a greenhouse. Root dip application with bioformulation(s) resulted in a significant reduction of the root rot index. In addition, bioformulations increased plant growth attributing traits significantly relative to untreated control. Accumulation of total phenols, peroxidase, polyphenoloxidase and phenylalanine ammonia lyase increased in chitin-supplemented Trichoderma/Hypocrea formulation-treated plants challenged with R. solani. The results suggest that chitin-fortified bioformulation(s) could be an effective system to control root rot of tomato in an eco-compatible manner.     

Regulated expression of peripheral node addressin-positive high endothelial venules controls seeding of B lymphocytes into developing neonatal rabbit appendix

Young rabbit appendix is a homologue of chicken bursa of Fabricius; both are crucial sites for preimmune B-cell repertoire diversification. Here, we report that appendix regulates precursor lymphocyte recruitment for further development by modulating the sites of extravasation. The total area of peripheral node addressin-positive (PNAd(+)) high endothelial venules (HEVs) increased from 1 day to 1 week after birth, remained constant up to 2 weeks and declined to a low and persistent amount by 3 weeks. In normal 1-week and manipulated 5-week appendix where growth of follicles was retarded, PNAd(+) HEVs were present in the basolateral sides of B-cell follicles whereas, in normal 5-wk-appendix these were restricted to T-cell areas. The PNAd was expressed on the lumenal surface of HEVs. The proportions of CD62L(+) B cells in appendix declined from approximately 40% at 3 days to 2-3% at 4 weeks. In lymphocyte transfer experiments, CD62L(+) B cells were preferentially recruited compared with CD62L(-) B cells, anti-PNAd antibody blocked migration of B cells by approximately 50%, and 100 times more B cells were recruited in 1-week compared to 6-week appendix. Thus, a unique spatiotemporal expression pattern of PNAd(+) HEVs is associated with development of B-cell follicles. This regulates migration of blood-borne B-lymphocytes into developing appendix by interacting with CD62L.     

A survey of avian polyomavirus (APV) infection in imported and domestic bred psittacine birds in Japan

Although birds infected with avian polyomavirus (APV) subclinically could be a source of infection, no epidemiological studies of APV in psittacine birds have been reported in Japan. In the present study, we investigated subclinical morbidity rate of APV in imported and domestically bred psittacine birds by polymerase chain reaction (PCR). Of 402 live birds from which blood or feather samples were taken between April, 2003 and March, 2004, 11 (2.7%) were found to be APV positive. The DNA sequences of the APV t/T antigen region were determined for five APV-positive randomly selected samples and were found to be conserved.     

Landscaping and performance of some aesthetic plant species in hot, arid conditions of India

Establishment of ornamental and aesthetic plants in hot, arid conditions of India is difficult due to the prevailing climatic, edaphic and biotic factors. Effect of turfgrass on the growth of ornamental plants in hot arid conditions has not been studied so far anywhere in the world. A study was conducted on the campus of Arid Forest Research Institute, Jodhpur, India to assess the performance of a few ornamental plant species in combination with turfgrass and without turfgrass with respect to different soil tilling intervals. Growth of plants was better with turfgrass than without turfgrass. We suggest adopting a soil tilling interval of 30 days to achieve optimum growth of ornamental plant species in terms of height and crown diameter. Our results can help reduce labor costs and achieving better landscapes in fewer days in hot urban conditions of Indian sub continent.     

Surface modification of polymer optical fibers for enhanced side emission behavior

The polymer optical fiber with trade name Flexi was used in this research, because of its flexibility and the range of diameters available in the market. These fibers were dyed using commercial disperse dye under various conditions of dye concentration and dyeing time. Samples were analyzed for side emission of light with the use of an instrument which was specifically designed for the measurement of this nature. The results showed that the dye penetration is dependent on time, if dye concentration and temperature are kept constant. After 40 min of dyeing, the fiber core showed an increase in side emission with lower loss due to attenuation. Excessive time in the hot conditions also degraded the fiber, so that the fiber became very stiff and brittle. Fibers were also subjected to heat, in the form of boiling water bath, for selected periods of time, and it was found that the effect was similar to that of the prior experiments. Surface treatment of Flexi fibers was carried out using ethyl acetate as an etching agent, to possibly accept more disperse dye on the fiber surface. The results after dyeing showed a more significant improvement in both side emission and attenuation of light.